BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032A02SP1|AL429494
(871 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig720 1727 0.0
3x_Contig1044 125 2e-28
3x_Contig1798 123 6e-28
3x_Contig587 123 6e-28
3x_Contig1347 115 2e-25
3x_Contig1020 115 2e-25
3x_Contig848 115 2e-25
3x_Contig1 115 2e-25
>3x_Contig720
Length = 2178
Score = 1727 bits (871), Expect = 0.0
Identities = 871/871 (100%)
Strand = Plus / Minus
Query: 1 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccaacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1437 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccaacaag 1378
Query: 61 gcagaattgatgtctggtggagtcctttgctgactcacatcagagacggtcgtcatgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 gcagaattgatgtctggtggagtcctttgctgactcacatcagagacggtcgtcatgtga 1318
Query: 121 taataataataataataattcatcattcttctcttttttctcacgtgacttgcgaggaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 taataataataataataattcatcattcttctcttttttctcacgtgacttgcgaggaat 1258
Query: 181 atcaaacggacgtggtgaaaaagaaaagaaagaacttttgcaaaaattgaaatatcagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 atcaaacggacgtggtgaaaaagaaaagaaagaacttttgcaaaaattgaaatatcagct 1198
Query: 241 tttgaaaattttcagctcatctcatctcatctatatctagattctttattcactacagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 tttgaaaattttcagctcatctcatctcatctatatctagattctttattcactacagtc 1138
Query: 301 taattgacaagcaacaacattcaattaactaaaatactctctcttctaagcttgaattcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 taattgacaagcaacaacattcaattaactaaaatactctctcttctaagcttgaattcc 1078
Query: 361 attgtttcgaggatagcttgattttatcttcaaacagcattttcgattacttcaaaccga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 attgtttcgaggatagcttgattttatcttcaaacagcattttcgattacttcaaaccga 1018
Query: 421 aaaccattgtgccttttttcactgttctgacctaatatacgttatctgctctatcataaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 aaaccattgtgccttttttcactgttctgacctaatatacgttatctgctctatcataaa 958
Query: 481 accggtggctaatattcgcaggattcataggaagcgggacagtgctaataataataccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 accggtggctaatattcgcaggattcataggaagcgggacagtgctaataataataccat 898
Query: 541 taagatatatcagctgttaccatgtcttcggttattcttcctccacaagctccagttgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 taagatatatcagctgttaccatgtcttcggttattcttcctccacaagctccagttgag 838
Query: 601 cgtttgaacagaactgctagtttcaggactttggaaagagaatcaagatttattaatcct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 cgtttgaacagaactgctagtttcaggactttggaaagagaatcaagatttattaatcct 778
Query: 661 ccaaaggataaatctgcatacccattcctagcggacgctgtacagccacacattggctcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ccaaaggataaatctgcatacccattcctagcggacgctgtacagccacacattggctcc 718
Query: 721 ttcaatgcattgactgagggacctgatggtggtttgttaaacctaggggcaaaagatatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ttcaatgcattgactgagggacctgatggtggtttgttaaacctaggggcaaaagatatt 658
Query: 781 ggatccaaagttattttcgatggtaagggatcggacactaacccaaactacttgggtaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ggatccaaagttattttcgatggtaagggatcggacactaacccaaactacttgggtaac 598
Query: 841 aaattatctttgagtattgaacaggtgtcta 871
|||||||||||||||||||||||||||||||
Sbjct: 597 aaattatctttgagtattgaacaggtgtcta 567
>3x_Contig1044
Length = 4552
Score = 125 bits (63), Expect = 2e-28
Identities = 63/63 (100%)
Strand = Plus / Minus
Query: 1 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccaacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3613 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccaacaag 3554
Query: 61 gca 63
|||
Sbjct: 3553 gca 3551
>3x_Contig1798
Length = 38968
Score = 123 bits (62), Expect = 6e-28
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccaacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31971 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccaacaag 32030
Query: 61 gc 62
||
Sbjct: 32031 gc 32032
>3x_Contig587
Length = 1528
Score = 123 bits (62), Expect = 6e-28
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccaacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccaacaag 254
Query: 61 gc 62
||
Sbjct: 255 gc 256
>3x_Contig1347
Length = 6130
Score = 115 bits (58), Expect = 2e-25
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccaacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4668 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccagcaag 4727
Query: 61 gc 62
||
Sbjct: 4728 gc 4729
>3x_Contig1020
Length = 4879
Score = 115 bits (58), Expect = 2e-25
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccaacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3560 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccagcaag 3619
Query: 61 gc 62
||
Sbjct: 3620 gc 3621
>3x_Contig848
Length = 3091
Score = 115 bits (58), Expect = 2e-25
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccaacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1021 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccagcaag 1080
Query: 61 gc 62
||
Sbjct: 1081 gc 1082
>3x_Contig1
Length = 735
Score = 115 bits (58), Expect = 2e-25
Identities = 61/62 (98%)
Strand = Plus / Minus
Query: 1 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccaacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 259 gggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgattgcgccagcaag 200
Query: 61 gc 62
||
Sbjct: 199 gc 198
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9851
Number of Sequences: 1807
Number of extensions: 9851
Number of successful extensions: 649
Number of sequences better than 1.0e-20: 8
length of query: 871
length of database: 10,358,551
effective HSP length: 16
effective length of query: 855
effective length of database: 10,329,639
effective search space: 8831841345
effective search space used: 8831841345
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)